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  1. Barna Package
  2. BARNA-196

Error: SIZE_DISTRIBUTION with N(mean, sd) won't work. It just doesn't.

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      FILTERING    true
      SIZE_DISTRIBUTION    N(200,50)
      SIZE_SAMPLING    AC
      

      I get [Error] 100. I have tried with UR and with NB fragmentation, I have tried setting FRAG_UR_ETA and by not setting ETA. Nothing works if I give N(mean, sd). Note that the size distribution mean is being set to NaN.

      [LIBRARY] creating the cDNA libary
      [INFO] **Size Distribution : Distribution mean: NaN**
      ...
          Processing Fragments ********** OK (00:05:13)
              71948002 mol: in 71914801, new 33201, out 71931246
              avg Len 165.75595, maxLen 575
              initializing Selected Size distribution
      [ERROR] 100
      

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            micha Micha Sammeth
            micha Micha Sammeth
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