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  1. Barna Package
  2. BARNA-386

astalavista scorer always complains of pre-existing 'h' flag

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    Details

    • Type: Bug
    • Status: Resolved
    • Priority: Major
    • Resolution: Fixed
    • Affects Version/s: AStalavista 3.2 (API 1.22)
    • Component/s: Astalavista
    • Labels:
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      Description

      Regardless of which parameter flags I give AStalavista Scorer, it always gives the error below and then stops:

      _[INFO] Astalavista v3.2.1-SNAPSHOT (Flux Library: 1.30-SNAPSHOT)

      [ERROR] Parameter error : A parameter with short flag 'h' has already been registered.
      com.martiansoftware.jsap.JSAPException: A parameter with short flag 'h' has already been registered.
      at com.martiansoftware.jsap.JSAP.registerParameter(Unknown Source)
      at barna.commons.launcher.Flux.main(Flux.java:156)
      _

      I installed AStalavista locally, by cloning the Bitbucket git repository and building from source according to the instructions on the Confluence wiki (http://sammeth.net/confluence/display/ASTA/2+-+Download). Other tools like sortGTF do not give this error. Neither does astalavista when run by itself without any tools specified.

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            Assignee:
            micha Micha Sammeth
            Reporter:
            martin Martin Oti
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              Resolved: